Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRC | rs112400363 | chr19:46310228 | C/G | 8.05E-8 | 492 | 38.83 | 28.17 | 1.77 | KM Plot |
KIRC | rs112464402 | chr11:34803943 | T/TA | 9.4E-8 | 504 | 37.5 | 32.23 | 3.3 | KM Plot |
KIRC | rs112477753 | chr11:1560399 | C/T | 9.07E-5 | 505 | 37.47 | 37.2 | 5.47 | KM Plot |
KIRC | rs112582432 | chr6:168398260 | C/G | 0.000101 | 493 | 37.03 | 38.9 | 7.57 | KM Plot |
KIRC | rs112605148 | chr9:92166218 | C/T | 2.6E-5 | 506 | 36.88 | 47.97 | 10.62 | KM Plot |
KIRC | rs112655992 | chr19:46344620 | G/A | 7.81E-8 | 508 | 38.1 | 28.03 | 1.77 | KM Plot |
KIRC | rs11278568 | chr20:45088514 | AGATGATATT/A | 1.31E-11 | 506 | 38.47 | 31.07 | 4.75 | KM Plot |
KIRC | rs112896170 | chr4:169170100 | A/G | 2.18E-8 | 508 | 37.35 | 37.67 | 3.1 | KM Plot |
KIRC | rs113003434 | chr2:109481122 | C/T | 1.28E-11 | 508 | 37.7 | 27.4 | 2.3 | KM Plot |
KIRC | rs113027382 | chr4:107884467 | A/G | 4.15E-11 | 508 | 37.73 | 30.9 | 5.53 | KM Plot |
KIRC | rs113199906 | chr15:24458008 | A/G | 2.86E-8 | 497 | 37.18 | 32.7 | 3.3 | KM Plot |
KIRC | rs113222530 | chr19:46361183 | A/G | 9.66E-8 | 503 | 38.83 | 28.65 | 1.77 | KM Plot |
KIRC | rs113328650 | chr4:169170206 | A/C | 2.18E-8 | 508 | 37.35 | 37.67 | 3.1 | KM Plot |
KIRC | rs113358590 | chr15:24433493 | C/T | 2.09E-8 | 503 | 37.53 | 31.7 | 3.3 | KM Plot |
KIRC | rs113362105 | chr6:34989541 | T/C | 0 | 503 | 37.5 | 38.52 | 1.43 | KM Plot |